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free online library of abbreviations and acronyms
Category: Dictionaries and writing aids
Free online library of full forms, abbreviations, acronyms, initialisms, references and much more. Registration not required.
Click here for more informationsPublished on 2012-09-28 21:19:52
The Atlas of histological images is part of the Anatomy Atlases, a digital library of anatomy information curated by Ronald A Bergman. Registration not required.
Click here for more informationsPublished on 2012-09-24 04:04:22
The Atlas present and interactive view of histologial images of human body. In each topic, you will find a laboratory exercise, and brief description of the histological material. Click on the highlighted terms to display the histological images. Registration not required.
Click here for more informationsPublished on 2012-09-24 03:55:17
MassBank is the first public repository of mass spectral data for sharing them among scientific research community. MassBank data are useful for the chemical identification and structure elucidation of chemical comounds detected by mass spectrometry. MassBank system is originally designed for public sharing of reference mass spectra for metabolite identification. It is also useful for their in-house or local sharing. Recently it finds another application; sharing mass spectra of unknown metabolites for metabolite profiling Registration not required.
Click here for more informationsPublished on 2012-09-20 10:52:29
DOAJ is a directory of Open Access Journals, maintained by Lund University, that covers free, full text, quality controlled scientific and scholarly journals. The aim of the Directory of Open Access Journals is to increase the visibility and ease of use of open access scientific and scholarly journals thereby promoting their increased usage and impact. The Directory aims to be comprehensive and cover all open access scientific and scholarly journals that use a quality control system to guarantee the content. Registration not required.
Click here for more informationsPublished on 2012-09-19 09:59:37
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Category: Gene expression, Biomedical communities
International Human Epigenome Consortium (IHEC) allows: Epigenome
The International Human Epigenome Consortium (IHEC) is a global consortium with the primary goal of providing free access to high-resolution reference human epigenome maps for normal and disease cell types to the research community. Registration required.
Click here for more informationsPublished on 2012-09-07 08:58:41
myIDP is an online application designed to guide early-career scientists through a confidential, rigorous process of introspection to create a customized career plan. myIDP provides an individual development plan (IDP) to explore career possibilities and set goals to follow the career path that fits you best. After the user has identified a long-term career goal, myIDP walks her or him through the process of setting short-term goals directed toward accumulating new skills and experiences important for that career choice. After each step, the user updates the plan, documenting efforts and progress. Registration required.
Click here for more informationsPublished on 2012-09-07 04:07:48
ProteinProphetTM automatically validates protein identifications made on the basis of peptides assigned to MS/MS spectra by database search programs such as SEQUEST Registration not required.
Click here for more informationsPublished on 2012-08-30 08:06:28
ArrayMining is a web-server for online automating microarray statistical analysis of gene and protein expression microarray data, designed as a supporting tool for investigation of the genetic components of diseases. By providing feature selection, clustering and prediction analysis, it performs five common gene expression analysis tasks:cross-study normalisation, feature selection, sample clustering, sample classification, network analysis, gene set analysis. Registration not required.
Click here for more informationsPublished on 2012-08-21 06:56:39
AltAnalyze is an easy-to-use application for microarry and RNA-Seq analysis. For splicing sensitive platforms, AltAnalyze will assess alternative exon expression along protein isoforms, domain composition and microRNA targeting. In addition to splicing-sensitive platforms, AltAnalyze provides comprehensive methods for conventional arrays (RMA summarization, QC, statistics, annotation, clustering, lineage characterization and gene-set enrichement). Registration not required.
Click here for more informationsPublished on 2012-08-21 06:51:18
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Designing and executing workflows
Category: Other software
Taverna allows: Workflow
Taverna is a multiplatform open source Management System written in Java for designing and executing workflows. A suite of tools used to design and execute scientific workflows and aid in silico experimentation. Registration not required.
Click here for more informationsPublished on 2012-08-21 06:37:51
The Progenetix database provides an overview of copy number abnormalities in human cancer from Comparative Genomic Hybridization (CGH) experiments. As a curated database, it collects genomic gain/loss information of individual cancer and leukemia cases, published in peer reviewed journals. Registration not required.
Click here for more informationsPublished on 2012-08-20 09:54:42
ColorBrewer is an online tool from Pennsylvania State University designed to help people select good color schemes for maps and other graphics. Registration not required.
Click here for more informationsPublished on 2012-08-16 07:09:53
Ensembl, a genome browser project, produces genome databases for vertebrates, and makes this information freely available online. Registration not required.
Click here for more informationsPublished on 2012-07-27 11:13:14
BioMed Central is a publisher of 206 peer-reviewed open access journals. All original research articles published by BioMed Central are made freely and permanently accessible online immediately upon publication. BioMed Central views open access to research as essential in order to ensure the rapid and efficient communication of research findings. BioMed Central's portfolio of 206 journals includes general titles BMC Biology and BMC Medicine alongside specialist journals (e.g. BMC Bioinformatics, Malaria Journal) that focus on particular disciplines . All the research published by BioMed Central's journals is open access, but BioMed Central also provides access to various additional products and services that require a subscription. For example, certain BioMed Central journals such as Genome Biology publish commissioned review content available only to subscribers. BioMed Central also operates Open Repository, a hosted digital repository solution for institutions. Registration not required.
Click here for more informationsPublished on 2012-07-27 11:03:39
The site proviedes an input form for creating primers around the Open Reading Frame of cDNAs. For primer design, the Primer3 program is used. The input file is a list of GenBank sequences. Registration not required.
Click here for more informationsPublished on 2012-07-18 05:39:14
Ilastik (Interactive Learning and Segmentation Toolkit) is an open-source tool that enables researchers to train a machine-learning Random Forest classifier algorithm to identify which pixels of an image belong to which class of interest, based on the researcher providing example regions of each. Using it requires no experience in image processing. Registration not required.
Click here for more informationsPublished on 2012-07-11 12:05:19
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This wiki is a community knowledge base for ImageJ and friends
Category: Imaging software
Image Net is a federally funded, multi-institution project to develop the next generation of ImageJ to include support for many features such as large multidimensional image support, a more flexible data model and improved developer resources. Registration required.
Click here for more informationsPublished on 2012-07-11 11:21:34
Fiji (Fiji is Just ImageJ) is an image processing package based on ImageJ and is currently the tool of choice in analysis of electron- microscopy data.Fiji is effectively an open-source distribution of ImageJ that includes a great variety of organized libraries, plugins relevant for biological research Registration not required.
Click here for more informationsPublished on 2012-07-09 10:56:46
FluoRender is an interactive rendering tool for confocal microscopy data visualization. It combines the renderings of multi-channel volume data and polygon mesh data, where the properties of each dataset can be adjusted independently and quickly. The tool is designed especially for neurobiologists, and it helps them better visualize the fluorescent-stained confocal samples. Registration not required.
Click here for more informationsPublished on 2012-07-09 09:02:42
Biomedical search tools
Online genomic tools
Online proteomics tools
Calculators
Biomedical lab tools
Scientific writing/reading
Biomedical communities
Biomedical funding and jobs
Medical topics
Biomedical softwares